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Showing :
PCA plot
•
reset
2
votes
10
replies
4.1k
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Problem reproducing PCA plot in DeSeq2 totuorial
DeSeq2
PCA plot
7.4 years ago
sarahmacdonald86
• 0
2
votes
2
replies
4.3k
views
PCA plot in DESeq2
deseq2
pca plot
updated 7.3 years ago by
Michael Love
42k • written 7.3 years ago by
pkachroo
▴ 10
2
votes
2
replies
1.1k
views
pcaGoPromoter PCA plot in R: issue with EntrezID conversion
pca
pca plot
pcagopromoter
updated 7.2 years ago by
James W. MacDonald
65k • written 7.2 years ago by
sherman.leung
▴ 10
1
vote
2
replies
971
views
How to create better separation in PCA plot
PCA plot
RNAseq
updated 4.3 years ago by
Kevin Blighe
★ 3.9k • written 4.3 years ago by
rajeshparmar4
▴ 10
0
votes
1
reply
781
views
PCA analysis in R for 780 genes in 20 samples.
pca plot
pca scree plot
pca2go
updated 6.1 years ago by
Steve Lianoglou
★ 13k • written 6.1 years ago by
suranandbabu85
• 0
5 results • Page
1 of 1
Recent ...
Replies
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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